CASSbase

clone(s) in cart (order)

Old browser version detected

This site is optimized for modern web browsers

Please upgrade your browser

Sorry!, some features may not work in outdated browsers

CASSBASE

Search
Manage
Analyze
- Expression Atlas
- Mesculenta Cyc
- Accession Usage
- Graphical Filtering
- Barcode Tools
- Population Structure
- Compare Trials
- Sequence Analysis
- BLAST
- Other
- Ontology Browser
- Compose a New Trait
- Document Browser
Maps
About
- About
- Contact
- Cite CassBase
- Wiki
- Manual
- Forum
- FTP Site

Advanced

This site uses cookies to provide logins and other features. Please accept the use of cookies by clicking Accept.

SGN Marker scaffold3299:161768

SGN-M3313

Synonyms

None

Locus associations

None

Mapped locations

Map: new cassava merged map
Map version 6 (location: 17657)
Chromosome XVIII
Position 23.86 cM
Confidence uncalculated
Protocol SNP

new cassava merged map

Map: Cassava GBS consensus map
Map version 4 (location: 3313)
Chromosome XVII
Position 19.55 cM
Confidence uncalculated
Protocol unknown

Cassava GBS consensus map

Related Markers

Related Genotyped Markers: These markers have been genotyped and share a name with this marker

Loading...

Genomic location of scaffold3299:161768

%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D3313 marker 3313

User comments

Please wait, checking for comments. (If comments do not show up, access them here)

Your Lists

Public Lists

List Contents

List Validation Report: Failed

Elements not found:

Optional: Add Missing Accessions to A List

Mismatched case

Click the Adjust Case button to align the case in the list with what is in the database.

Multiple mismatched case

Items listed here have mulitple case mismatches and must be fixed manually. If accessions need to be merged, contact the database directly.

List elements matching a synonym

Multiple synonym matches

Multiple synonym matches have to be resolved manually. Contact database administrators if necessary.

Fuzzy Search Results

Synonym Search Results

Create a New List from Unique Names:

Available Seedlots

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Create a New List from Selected Seedlots:

Manage Seedlots

List Comparison

Download column:

Your Datasets

Public Datasets

Dataset Contents

Dataset Validation Failed

Elements not found:

Your Calendar

Having trouble viewing events on the calendar?
Are you associated with the breeding program you are interested in viewing?

Calendar Permissions

Add New Event

Project:

Event Type:

Start:

End:

Description:

Web URL:

http://www.

Event Info

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

Edit Event

Project:

Event Type:

Start:

End:

Description:

Web URL:

Login

Show Password

Forgot Username

If you've forgotten your username, enter your email address below. An email will be sent with any account username(s) associated with your email address.

Email Address

Reset Password

To reset your password, please enter your email address. A link will be sent to that address with a link that will enable you to reset your password.

Email Address

Create New User

Notice

Before creating a new account, please check if you already have an account using the directory search.
A link will be emailed to you. Please click on it to activate the account.
All fields are required.

First Name:

Last Name:

Organization:

Username:

Username must be at least 7 characters long.

Password:

Password must be at least 7 characters long and different from your username.

Confirm Password:

Password must be at least 7 characters long and different from your username.

Email Address:

An email will be sent to this address requiring you to confirm its receipt to activate your account.

Are you Human?

What is 100 + 4?

Working

Progress

CASSbase is located at the Boyce Thompson Institute for Plant Research.